Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lhx3P50481 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
Lhx3P50481 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lhx3P50481 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx3P50481 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.61□□□□□ -0.39
Lhx3P50481 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lhx3P50481 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.61□□□□□ -0.39
Lhx3P50481 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Gm5070-201ENSMUST00000177599 862 ntBASIC12.61□□□□□ -0.39
Lhx3P50481 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.61□□□□□ -0.39
Lhx3P50481 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.61□□□□□ -0.39
Lhx3P50481 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lhx3P50481 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx3P50481 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lhx3P50481 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lhx3P50481 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Lhx3P50481 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.6□□□□□ -0.39
Lhx3P50481 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.6□□□□□ -0.39
Lhx3P50481 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lhx3P50481 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.6□□□□□ -0.39
Lhx3P50481 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lhx3P50481 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.6□□□□□ -0.39
Lhx3P50481 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.6□□□□□ -0.39
Lhx3P50481 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lhx3P50481 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lhx3P50481 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.6□□□□□ -0.39
Lhx3P50481 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.6□□□□□ -0.39
Lhx3P50481 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx3P50481 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx3P50481 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx3P50481 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx3P50481 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx3P50481 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx3P50481 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx3P50481 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.59□□□□□ -0.39
Lhx3P50481 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.59□□□□□ -0.39
Lhx3P50481 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms