Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.33□□□□□ -0.76
Nkx2-1P50220 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.33□□□□□ -0.76
Nkx2-1P50220 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-1P50220 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Auts2-212ENSMUST00000178555 309 ntBASIC10.32□□□□□ -0.76
Nkx2-1P50220 Mir6977-201ENSMUST00000184960 64 ntBASIC10.32□□□□□ -0.76
Nkx2-1P50220 Gm42612-201ENSMUST00000197986 623 ntBASIC10.32□□□□□ -0.76
Nkx2-1P50220 Gm43170-201ENSMUST00000199827 612 ntBASIC10.32□□□□□ -0.76
Nkx2-1P50220 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-1P50220 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms