Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.03□□□□□ -0.16
Atoh1P48985 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atoh1P48985 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atoh1P48985 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atoh1P48985 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Atoh1P48985 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.03□□□□□ -0.16
Atoh1P48985 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atoh1P48985 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atoh1P48985 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atoh1P48985 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Atoh1P48985 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atoh1P48985 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atoh1P48985 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atoh1P48985 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.02□□□□□ -0.16
Atoh1P48985 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.02□□□□□ -0.16
Atoh1P48985 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Atoh1P48985 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Atoh1P48985 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atoh1P48985 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Atoh1P48985 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Atoh1P48985 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.02□□□□□ -0.17
Atoh1P48985 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.02□□□□□ -0.17
Atoh1P48985 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.02□□□□□ -0.17
Atoh1P48985 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.02□□□□□ -0.17
Atoh1P48985 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.02□□□□□ -0.17
Atoh1P48985 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.02□□□□□ -0.17
Atoh1P48985 Gm44980-201ENSMUST00000205826 314 ntBASIC14.02□□□□□ -0.17
Atoh1P48985 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.02□□□□□ -0.17
Atoh1P48985 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.02□□□□□ -0.17
Atoh1P48985 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atoh1P48985 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atoh1P48985 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Atoh1P48985 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Gm13047-201ENSMUST00000117116 815 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 Gm15352-201ENSMUST00000118696 270 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 Gm8737-201ENSMUST00000122208 642 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 Gm9645-201ENSMUST00000197131 792 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.01□□□□□ -0.17
Atoh1P48985 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atoh1P48985 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atoh1P48985 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Atoh1P48985 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14□□□□□ -0.17
Atoh1P48985 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Atoh1P48985 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atoh1P48985 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14□□□□□ -0.17
Atoh1P48985 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Atoh1P48985 Gm11949-201ENSMUST00000117640 372 ntBASIC14□□□□□ -0.17
Atoh1P48985 Gm16071-201ENSMUST00000119589 793 ntBASIC14□□□□□ -0.17
Atoh1P48985 Gm15566-201ENSMUST00000121130 590 ntBASIC14□□□□□ -0.17
Atoh1P48985 Gm13263-201ENSMUST00000121271 838 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms