Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
TgfaP48030 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TgfaP48030 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.83□□□□□ -0.68
TgfaP48030 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TgfaP48030 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.83□□□□□ -0.68
TgfaP48030 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Gm24891-201ENSMUST00000104391 136 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.83□□□□□ -0.68
TgfaP48030 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.83□□□□□ -0.68
TgfaP48030 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.83□□□□□ -0.68
TgfaP48030 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.83□□□□□ -0.68
TgfaP48030 Gm8365-201ENSMUST00000197334 648 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Gm4482-201ENSMUST00000200876 742 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TgfaP48030 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TgfaP48030 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.83□□□□□ -0.68
TgfaP48030 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
TgfaP48030 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TgfaP48030 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TgfaP48030 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
TgfaP48030 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.83□□□□□ -0.68
TgfaP48030 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.83□□□□□ -0.68
TgfaP48030 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TgfaP48030 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TgfaP48030 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TgfaP48030 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.82□□□□□ -0.68
TgfaP48030 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.82□□□□□ -0.68
TgfaP48030 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
TgfaP48030 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TgfaP48030 Gm7851-201ENSMUST00000117574 323 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
TgfaP48030 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TgfaP48030 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TgfaP48030 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TgfaP48030 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
TgfaP48030 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Ginm1-202ENSMUST00000065124 300 ntBASIC10.82□□□□□ -0.68
TgfaP48030 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TgfaP48030 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TgfaP48030 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TgfaP48030 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TgfaP48030 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TgfaP48030 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms