Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.48□□□□□ -0.73
Hmx3P42581 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmx3P42581 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmx3P42581 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Hmx3P42581 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Hmx3P42581 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.47□□□□□ -0.73
Hmx3P42581 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Hmx3P42581 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Gm42612-201ENSMUST00000197986 623 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Gm43170-201ENSMUST00000199827 612 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Gm19078-201ENSMUST00000206311 727 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Gm7730-201ENSMUST00000212486 454 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Gm6218-201ENSMUST00000219812 628 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.47□□□□□ -0.73
Hmx3P42581 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.47□□□□□ -0.73
Hmx3P42581 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Hmx3P42581 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Hmx3P42581 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Hmx3P42581 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmx3P42581 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Hmx3P42581 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Hmx3P42581 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Hmx3P42581 Gm22189-201ENSMUST00000103822 86 ntBASIC10.46□□□□□ -0.73
Hmx3P42581 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Hmx3P42581 Gm15678-201ENSMUST00000117573 960 ntBASIC10.46□□□□□ -0.73
Hmx3P42581 Gm11524-201ENSMUST00000119349 807 ntBASIC10.46□□□□□ -0.73
Hmx3P42581 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.46□□□□□ -0.73
Hmx3P42581 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.46□□□□□ -0.73
Hmx3P42581 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Hmx3P42581 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Hmx3P42581 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.46□□□□□ -0.73
Hmx3P42581 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.46□□□□□ -0.73
Hmx3P42581 Gm44855-201ENSMUST00000205725 362 ntBASIC10.46□□□□□ -0.73
Hmx3P42581 Gm5161-201ENSMUST00000075243 853 ntBASIC10.46□□□□□ -0.73
Hmx3P42581 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hmx3P42581 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hmx3P42581 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.46□□□□□ -0.74
Hmx3P42581 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms