Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh4P39038 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh4P39038 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh4P39038 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh4P39038 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh4P39038 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh4P39038 Gm12058-201ENSMUST00000118614 437 ntBASIC11.96□□□□□ -0.49
Cdh4P39038 Gm13736-201ENSMUST00000119272 253 ntBASIC11.96□□□□□ -0.49
Cdh4P39038 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Cdh4P39038 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdh4P39038 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Cdh4P39038 Gm43179-201ENSMUST00000198797 275 ntBASIC11.96□□□□□ -0.49
Cdh4P39038 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Gm6007-201ENSMUST00000208170 823 ntBASIC11.96□□□□□ -0.49
Cdh4P39038 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.96□□□□□ -0.49
Cdh4P39038 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.96□□□□□ -0.49
Cdh4P39038 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh4P39038 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cdh4P39038 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cdh4P39038 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh4P39038 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdh4P39038 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Cdh4P39038 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdh4P39038 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm2546-201ENSMUST00000182630 991 ntBASIC11.95□□□□□ -0.5
Cdh4P39038 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdh4P39038 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdh4P39038 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdh4P39038 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh4P39038 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdh4P39038 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh4P39038 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh4P39038 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh4P39038 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh4P39038 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.94□□□□□ -0.5
Cdh4P39038 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.94□□□□□ -0.5
Cdh4P39038 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdh4P39038 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.94□□□□□ -0.5
Cdh4P39038 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdh4P39038 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh4P39038 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms