Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
HmgclP38060 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HmgclP38060 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HmgclP38060 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.28□□□□□ -0.44
HmgclP38060 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.28□□□□□ -0.44
HmgclP38060 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
HmgclP38060 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.28□□□□□ -0.44
HmgclP38060 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.28□□□□□ -0.44
HmgclP38060 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
HmgclP38060 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.28□□□□□ -0.44
HmgclP38060 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.28□□□□□ -0.44
HmgclP38060 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HmgclP38060 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.28□□□□□ -0.44
HmgclP38060 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.28□□□□□ -0.44
HmgclP38060 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.28□□□□□ -0.44
HmgclP38060 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.28□□□□□ -0.44
HmgclP38060 Gm29396-201ENSMUST00000185659 716 ntBASIC12.28□□□□□ -0.44
HmgclP38060 Olfr284-202ENSMUST00000206647 966 ntBASIC12.28□□□□□ -0.44
HmgclP38060 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.28□□□□□ -0.44
HmgclP38060 Morn2-202ENSMUST00000227729 656 ntBASIC12.28□□□□□ -0.44
HmgclP38060 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
HmgclP38060 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
HmgclP38060 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HmgclP38060 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
HmgclP38060 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
HmgclP38060 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.27□□□□□ -0.44
HmgclP38060 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
HmgclP38060 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HmgclP38060 Gm13297-201ENSMUST00000120205 934 ntBASIC12.27□□□□□ -0.45
HmgclP38060 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.27□□□□□ -0.45
HmgclP38060 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.27□□□□□ -0.45
HmgclP38060 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.27□□□□□ -0.45
HmgclP38060 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.27□□□□□ -0.45
HmgclP38060 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HmgclP38060 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HmgclP38060 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
HmgclP38060 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HmgclP38060 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HmgclP38060 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
HmgclP38060 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HmgclP38060 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HmgclP38060 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.27□□□□□ -0.45
HmgclP38060 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HmgclP38060 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms