Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.85□□□□□ -0.83
Rom1P32958 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rom1P32958 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Rom1P32958 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rom1P32958 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rom1P32958 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Rom1P32958 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Rom1P32958 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Rom1P32958 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Gm22175-201ENSMUST00000175007 78 ntBASIC9.84□□□□□ -0.83
Rom1P32958 Gm27397-201ENSMUST00000184997 107 ntBASIC9.84□□□□□ -0.83
Rom1P32958 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Gm44882-201ENSMUST00000205702 802 ntBASIC9.84□□□□□ -0.83
Rom1P32958 Chchd1-203ENSMUST00000224633 557 ntBASIC9.84□□□□□ -0.83
Rom1P32958 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Gm8396-201ENSMUST00000057361 823 ntBASIC9.84□□□□□ -0.83
Rom1P32958 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.84□□□□□ -0.83
Rom1P32958 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.84□□□□□ -0.83
Rom1P32958 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Rom1P32958 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Rom1P32958 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.84□□□□□ -0.83
Rom1P32958 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rom1P32958 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.83□□□□□ -0.84
Rom1P32958 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.83□□□□□ -0.84
Rom1P32958 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.83□□□□□ -0.84
Rom1P32958 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.83□□□□□ -0.84
Rom1P32958 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Rom1P32958 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.83□□□□□ -0.84
Rom1P32958 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.83□□□□□ -0.84
Rom1P32958 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Gm24231-201ENSMUST00000104315 133 ntBASIC9.83□□□□□ -0.84
Rom1P32958 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.83□□□□□ -0.84
Rom1P32958 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.83□□□□□ -0.84
Rom1P32958 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Rom1P32958 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rom1P32958 Gm25927-201ENSMUST00000175058 117 ntBASIC9.83□□□□□ -0.84
Rom1P32958 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Rom1P32958 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms