Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
Vcam1P29533 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Gm7851-201ENSMUST00000117574 323 ntBASIC14.27□□□□□ -0.13
Vcam1P29533 Gm11941-201ENSMUST00000119904 610 ntBASIC14.27□□□□□ -0.13
Vcam1P29533 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.27□□□□□ -0.13
Vcam1P29533 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.27□□□□□ -0.13
Vcam1P29533 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.27□□□□□ -0.13
Vcam1P29533 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.27□□□□□ -0.13
Vcam1P29533 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.27□□□□□ -0.13
Vcam1P29533 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.27□□□□□ -0.13
Vcam1P29533 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vcam1P29533 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.27□□□□□ -0.13
Vcam1P29533 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Vcam1P29533 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vcam1P29533 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcam1P29533 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Vcam1P29533 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vcam1P29533 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vcam1P29533 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.26□□□□□ -0.13
Vcam1P29533 Gm26286-201ENSMUST00000104166 134 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Gm12501-201ENSMUST00000119163 529 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.26□□□□□ -0.13
Vcam1P29533 Gm3332-201ENSMUST00000189337 928 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Vcam1P29533 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Ntng1-201ENSMUST00000051253 327 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Gm26448-201ENSMUST00000082446 203 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vcam1P29533 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.26□□□□□ -0.13
Vcam1P29533 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcam1P29533 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vcam1P29533 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Vcam1P29533 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vcam1P29533 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm12165-201ENSMUST00000117047 342 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm13408-201ENSMUST00000119822 798 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm14247-201ENSMUST00000120950 237 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm13935-201ENSMUST00000121859 798 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm5733-201ENSMUST00000190232 939 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm4482-201ENSMUST00000200876 742 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm44882-201ENSMUST00000205702 802 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.25□□□□□ -0.13
Vcam1P29533 Gm29787-201ENSMUST00000222129 849 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Gm807-202ENSMUST00000224929 408 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.25□□□□□ -0.13
Vcam1P29533 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.25□□□□□ -0.13
Vcam1P29533 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vcam1P29533 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcam1P29533 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms