Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col2a1P28481 Gm10179-201ENSMUST00000086233 688 ntBASIC13.97□□□□□ -0.17
Col2a1P28481 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Col2a1P28481 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col2a1P28481 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col2a1P28481 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.96□□□□□ -0.17
Col2a1P28481 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col2a1P28481 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Col2a1P28481 Gm22711-201ENSMUST00000116890 133 ntBASIC13.96□□□□□ -0.17
Col2a1P28481 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.96□□□□□ -0.17
Col2a1P28481 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Gm17391-201ENSMUST00000171036 126 ntBASIC13.96□□□□□ -0.17
Col2a1P28481 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.96□□□□□ -0.17
Col2a1P28481 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.96□□□□□ -0.17
Col2a1P28481 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.96□□□□□ -0.17
Col2a1P28481 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.96□□□□□ -0.17
Col2a1P28481 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Gm45575-201ENSMUST00000210283 548 ntBASIC13.96□□□□□ -0.17
Col2a1P28481 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.96□□□□□ -0.17
Col2a1P28481 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col2a1P28481 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col2a1P28481 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.96□□□□□ -0.18
Col2a1P28481 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.96□□□□□ -0.18
Col2a1P28481 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col2a1P28481 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm15881-201ENSMUST00000148792 942 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm9192-201ENSMUST00000183221 985 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Gm28686-201ENSMUST00000187404 609 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Gm37246-201ENSMUST00000192665 835 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col2a1P28481 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Col2a1P28481 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.95□□□□□ -0.18
Col2a1P28481 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col2a1P28481 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col2a1P28481 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col2a1P28481 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col2a1P28481 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms