Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Gm31256-201ENSMUST00000194705 506 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Gm7783-201ENSMUST00000204795 781 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pde6aP27664 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6aP27664 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6aP27664 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.44□□□□□ -0.1
Pde6aP27664 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.44□□□□□ -0.1
Pde6aP27664 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6aP27664 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6aP27664 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pde6aP27664 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pde6aP27664 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.43□□□□□ -0.1
Pde6aP27664 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Gm44364-201ENSMUST00000198368 141 ntBASIC14.43□□□□□ -0.1
Pde6aP27664 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.43□□□□□ -0.1
Pde6aP27664 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.43□□□□□ -0.1
Pde6aP27664 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.43□□□□□ -0.1
Pde6aP27664 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pde6aP27664 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.43□□□□□ -0.1
Pde6aP27664 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pde6aP27664 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pde6aP27664 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pde6aP27664 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6aP27664 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pde6aP27664 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.42□□□□□ -0.1
Pde6aP27664 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pde6aP27664 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm15547-201ENSMUST00000122152 333 ntBASIC14.42□□□□□ -0.1
Pde6aP27664 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6aP27664 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.42□□□□□ -0.1
Pde6aP27664 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm44882-201ENSMUST00000205702 802 ntBASIC14.42□□□□□ -0.1
Pde6aP27664 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6aP27664 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Pde6aP27664 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6aP27664 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6aP27664 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.41□□□□□ -0.1
Pde6aP27664 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6aP27664 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6aP27664 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6aP27664 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6aP27664 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6aP27664 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.41□□□□□ -0.1
Pde6aP27664 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6aP27664 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6aP27664 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.41□□□□□ -0.1
Pde6aP27664 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms