Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Gm14247-201ENSMUST00000120950 237 ntBASIC14.43□□□□□ -0.1
Col1a1P11087 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.43□□□□□ -0.1
Col1a1P11087 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.43□□□□□ -0.1
Col1a1P11087 Gm25951-201ENSMUST00000175330 64 ntBASIC14.43□□□□□ -0.1
Col1a1P11087 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.43□□□□□ -0.1
Col1a1P11087 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.43□□□□□ -0.1
Col1a1P11087 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.43□□□□□ -0.1
Col1a1P11087 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col1a1P11087 Gm9645-201ENSMUST00000197131 792 ntBASIC14.43□□□□□ -0.1
Col1a1P11087 Gm44329-201ENSMUST00000197469 112 ntBASIC14.43□□□□□ -0.1
Col1a1P11087 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.43□□□□□ -0.1
Col1a1P11087 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Col1a1P11087 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.43□□□□□ -0.1
Col1a1P11087 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col1a1P11087 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm23912-201ENSMUST00000104687 87 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Gm5419-201ENSMUST00000119301 527 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Gm11660-201ENSMUST00000120955 412 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Gm23218-201ENSMUST00000158124 276 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col1a1P11087 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm3551-201ENSMUST00000190750 664 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Gm37458-201ENSMUST00000194055 410 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Gm19091-201ENSMUST00000208120 978 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.42□□□□□ -0.1
Col1a1P11087 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.42□□□□□ -0.1
Col1a1P11087 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.42□□□□□ -0.1
Col1a1P11087 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.42□□□□□ -0.1
Col1a1P11087 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.42□□□□□ -0.1
Col1a1P11087 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm14193-201ENSMUST00000105067 153 ntBASIC14.41□□□□□ -0.1
Col1a1P11087 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.41□□□□□ -0.1
Col1a1P11087 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm4654-201ENSMUST00000183305 982 ntBASIC14.41□□□□□ -0.1
Col1a1P11087 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col1a1P11087 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.41□□□□□ -0.1
Col1a1P11087 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.41□□□□□ -0.1
Col1a1P11087 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.41□□□□□ -0.1
Col1a1P11087 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.41□□□□□ -0.1
Col1a1P11087 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.41□□□□□ -0.1
Col1a1P11087 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col1a1P11087 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms