Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm13786-201ENSMUST00000122371 333 ntBASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm8062-201ENSMUST00000139696 444 ntBASIC10.87□□□□□ -0.67
PtcraP0C6B2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm37201-201ENSMUST00000191845 523 ntBASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm44958-201ENSMUST00000203734 736 ntBASIC10.87□□□□□ -0.67
PtcraP0C6B2 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.87□□□□□ -0.67
PtcraP0C6B2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.87□□□□□ -0.67
PtcraP0C6B2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.87□□□□□ -0.67
PtcraP0C6B2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PtcraP0C6B2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm17420-201ENSMUST00000164753 153 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm38158-201ENSMUST00000194617 339 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm18054-201ENSMUST00000207539 555 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm7046-201ENSMUST00000221351 977 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Thoc7-209ENSMUST00000225325 765 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms