Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm10608-202ENSMUST00000213924 676 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm19309-201ENSMUST00000218295 205 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm7399-201ENSMUST00000032395 858 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp6P0C0A3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp6P0C0A3 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.58□□□□□ -0.23
Chmp6P0C0A3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp6P0C0A3 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.58□□□□□ -0.23
Chmp6P0C0A3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp6P0C0A3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp6P0C0A3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Gm14921-201ENSMUST00000118643 908 ntBASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.58□□□□□ -0.24
Chmp6P0C0A3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms