Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.02■□□□□ -0
Col4a1P02463 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.02■□□□□ -0
Col4a1P02463 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Col4a1P02463 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col4a1P02463 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Gm22920-201ENSMUST00000102175 109 ntBASIC15.02□□□□□ -0.01
Col4a1P02463 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col4a1P02463 Gm13916-201ENSMUST00000117368 628 ntBASIC15.02□□□□□ -0.01
Col4a1P02463 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.02□□□□□ -0.01
Col4a1P02463 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Gm44158-201ENSMUST00000203881 505 ntBASIC15.02□□□□□ -0.01
Col4a1P02463 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.02□□□□□ -0.01
Col4a1P02463 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.02□□□□□ -0.01
Col4a1P02463 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.02□□□□□ -0.01
Col4a1P02463 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.02□□□□□ -0.01
Col4a1P02463 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a1P02463 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Gm9192-201ENSMUST00000183221 985 ntBASIC15.01□□□□□ -0.01
Col4a1P02463 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col4a1P02463 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.01□□□□□ -0.01
Col4a1P02463 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.01□□□□□ -0.01
Col4a1P02463 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a1P02463 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col4a1P02463 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col4a1P02463 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Gm8737-201ENSMUST00000122208 642 ntBASIC15□□□□□ -0.01
Col4a1P02463 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15□□□□□ -0.01
Col4a1P02463 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC15□□□□□ -0.01
Col4a1P02463 Gm8815-201ENSMUST00000173809 620 ntBASIC15□□□□□ -0.01
Col4a1P02463 Gm23045-201ENSMUST00000175041 96 ntBASIC15□□□□□ -0.01
Col4a1P02463 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15□□□□□ -0.01
Col4a1P02463 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15□□□□□ -0.01
Col4a1P02463 Gm42657-201ENSMUST00000201746 211 ntBASIC15□□□□□ -0.01
Col4a1P02463 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15□□□□□ -0.01
Col4a1P02463 Gm18636-201ENSMUST00000218846 1066 ntBASIC15□□□□□ -0.01
Col4a1P02463 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col4a1P02463 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col4a1P02463 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col4a1P02463 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col4a1P02463 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Gm17213-201ENSMUST00000165161 1360 ntBASIC15□□□□□ -0.01
Col4a1P02463 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col4a1P02463 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col4a1P02463 Shroom3-211ENSMUST00000225438 5742 ntBASIC15□□□□□ -0.01
Col4a1P02463 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15□□□□□ -0.01
Col4a1P02463 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Gm23912-201ENSMUST00000104687 87 ntBASIC15□□□□□ -0.01
Col4a1P02463 Gm11628-201ENSMUST00000117568 171 ntBASIC15□□□□□ -0.01
Col4a1P02463 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15□□□□□ -0.01
Col4a1P02463 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms