Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.84□□□□□ -0.35
CopeO89079 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.84□□□□□ -0.35
CopeO89079 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.84□□□□□ -0.35
CopeO89079 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CopeO89079 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CopeO89079 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.84□□□□□ -0.35
CopeO89079 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.84□□□□□ -0.35
CopeO89079 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Gm45668-201ENSMUST00000211271 493 ntBASIC12.84□□□□□ -0.35
CopeO89079 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.84□□□□□ -0.35
CopeO89079 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.84□□□□□ -0.35
CopeO89079 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.84□□□□□ -0.35
CopeO89079 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopeO89079 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CopeO89079 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CopeO89079 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CopeO89079 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CopeO89079 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.83□□□□□ -0.35
CopeO89079 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CopeO89079 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CopeO89079 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CopeO89079 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CopeO89079 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
CopeO89079 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CopeO89079 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CopeO89079 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.83□□□□□ -0.36
CopeO89079 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.83□□□□□ -0.36
CopeO89079 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.83□□□□□ -0.36
CopeO89079 Gm27701-201ENSMUST00000184498 110 ntBASIC12.83□□□□□ -0.36
CopeO89079 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.83□□□□□ -0.36
CopeO89079 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.83□□□□□ -0.36
CopeO89079 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CopeO89079 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.83□□□□□ -0.36
CopeO89079 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.83□□□□□ -0.36
CopeO89079 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.83□□□□□ -0.36
CopeO89079 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CopeO89079 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopeO89079 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CopeO89079 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CopeO89079 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CopeO89079 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CopeO89079 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Gm7488-201ENSMUST00000117148 684 ntBASIC12.82□□□□□ -0.36
CopeO89079 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.82□□□□□ -0.36
CopeO89079 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.82□□□□□ -0.36
CopeO89079 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CopeO89079 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.82□□□□□ -0.36
CopeO89079 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CopeO89079 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.82□□□□□ -0.36
CopeO89079 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.82□□□□□ -0.36
CopeO89079 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.82□□□□□ -0.36
CopeO89079 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopeO89079 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms