Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.52□□□□□ -0.57
Cops4O88544 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cops4O88544 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.51□□□□□ -0.57
Cops4O88544 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.51□□□□□ -0.57
Cops4O88544 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.51□□□□□ -0.57
Cops4O88544 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Cops4O88544 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.51□□□□□ -0.57
Cops4O88544 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Cops4O88544 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.51□□□□□ -0.57
Cops4O88544 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.51□□□□□ -0.57
Cops4O88544 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.51□□□□□ -0.57
Cops4O88544 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.51□□□□□ -0.57
Cops4O88544 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.51□□□□□ -0.57
Cops4O88544 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.51□□□□□ -0.57
Cops4O88544 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.51□□□□□ -0.57
Cops4O88544 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cops4O88544 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Cops4O88544 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.51□□□□□ -0.57
Cops4O88544 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.51□□□□□ -0.57
Cops4O88544 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.51□□□□□ -0.57
Cops4O88544 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cops4O88544 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.5□□□□□ -0.57
Cops4O88544 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Cops4O88544 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cops4O88544 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.5□□□□□ -0.57
Cops4O88544 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.5□□□□□ -0.57
Cops4O88544 Gm10576-201ENSMUST00000191927 825 ntBASIC11.5□□□□□ -0.57
Cops4O88544 Gm6983-201ENSMUST00000214912 628 ntBASIC11.5□□□□□ -0.57
Cops4O88544 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.5□□□□□ -0.57
Cops4O88544 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.5□□□□□ -0.57
Cops4O88544 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cops4O88544 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cops4O88544 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Gm12291-201ENSMUST00000121627 311 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms