Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ubr1O70481 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ubr1O70481 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ubr1O70481 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.87■□□□□ 0.13
Ubr1O70481 Gm11451-201ENSMUST00000118946 630 ntBASIC15.87■□□□□ 0.13
Ubr1O70481 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.87■□□□□ 0.13
Ubr1O70481 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.87■□□□□ 0.13
Ubr1O70481 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ubr1O70481 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.87■□□□□ 0.13
Ubr1O70481 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Ubr1O70481 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Ubr1O70481 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubr1O70481 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.86■□□□□ 0.13
Ubr1O70481 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Gm14193-201ENSMUST00000105067 153 ntBASIC15.86■□□□□ 0.13
Ubr1O70481 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Mir1901-201ENSMUST00000122616 78 ntBASIC15.86■□□□□ 0.13
Ubr1O70481 Gm3551-201ENSMUST00000190750 664 ntBASIC15.86■□□□□ 0.13
Ubr1O70481 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.86■□□□□ 0.13
Ubr1O70481 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.86■□□□□ 0.13
Ubr1O70481 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Ubr1O70481 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubr1O70481 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Gm13937-201ENSMUST00000121000 988 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.85■□□□□ 0.13
Ubr1O70481 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Ubr1O70481 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ubr1O70481 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm11628-201ENSMUST00000117568 171 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.85■□□□□ 0.13
Ubr1O70481 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm34023-201ENSMUST00000195539 217 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Gm44124-201ENSMUST00000204159 472 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.85■□□□□ 0.13
Ubr1O70481 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ubr1O70481 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ubr1O70481 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ubr1O70481 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.84■□□□□ 0.13
Ubr1O70481 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ubr1O70481 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms