Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.39□□□□□ -0.43
Ldb2O55203 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb2O55203 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb2O55203 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb2O55203 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb2O55203 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb2O55203 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ldb2O55203 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb2O55203 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb2O55203 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.38□□□□□ -0.43
Ldb2O55203 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ldb2O55203 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Gm14999-201ENSMUST00000121039 624 ntBASIC12.38□□□□□ -0.43
Ldb2O55203 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ldb2O55203 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Gm2546-201ENSMUST00000182630 991 ntBASIC12.38□□□□□ -0.43
Ldb2O55203 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.38□□□□□ -0.43
Ldb2O55203 Gm37201-201ENSMUST00000191845 523 ntBASIC12.38□□□□□ -0.43
Ldb2O55203 Gm7046-201ENSMUST00000221351 977 ntBASIC12.38□□□□□ -0.43
Ldb2O55203 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ldb2O55203 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.38□□□□□ -0.43
Ldb2O55203 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ldb2O55203 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ldb2O55203 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.38□□□□□ -0.43
Ldb2O55203 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb2O55203 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ldb2O55203 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.37□□□□□ -0.43
Ldb2O55203 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ldb2O55203 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ldb2O55203 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ldb2O55203 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ldb2O55203 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.37□□□□□ -0.43
Ldb2O55203 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ldb2O55203 Gm13570-201ENSMUST00000140763 309 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.37□□□□□ -0.43
Ldb2O55203 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Ldb2O55203 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ldb2O55203 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Gm42937-201ENSMUST00000197360 752 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Olfr284-202ENSMUST00000206647 966 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.37□□□□□ -0.43
Ldb2O55203 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.37□□□□□ -0.43
Ldb2O55203 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.37□□□□□ -0.43
Ldb2O55203 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ldb2O55203 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb2O55203 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb2O55203 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb2O55203 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb2O55203 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ldb2O55203 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb2O55203 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms