Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Rnf13O54965 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Gm27437-201ENSMUST00000183429 107 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 Gm8099-201ENSMUST00000200510 742 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.29□□□□□ -0.6
Rnf13O54965 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rnf13O54965 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.28□□□□□ -0.6
Rnf13O54965 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.28□□□□□ -0.6
Rnf13O54965 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.28□□□□□ -0.6
Rnf13O54965 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.28□□□□□ -0.6
Rnf13O54965 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.28□□□□□ -0.6
Rnf13O54965 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Gm22121-201ENSMUST00000175148 54 ntBASIC11.28□□□□□ -0.6
Rnf13O54965 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.28□□□□□ -0.6
Rnf13O54965 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.28□□□□□ -0.6
Rnf13O54965 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Rnf13O54965 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.28□□□□□ -0.6
Rnf13O54965 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rnf13O54965 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf13O54965 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf13O54965 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.27□□□□□ -0.6
Rnf13O54965 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.27□□□□□ -0.6
Rnf13O54965 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Rnf13O54965 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf13O54965 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rnf13O54965 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Rnf13O54965 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf13O54965 Gm15703-201ENSMUST00000120250 880 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms