Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc180J3QNE4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ccdc180J3QNE4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 AC124433.1-201ENSMUST00000224483 1063 ntBASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 AC134860.1-201ENSMUST00000224867 660 ntBASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Gm13910-201ENSMUST00000121752 1428 ntBASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc180J3QNE4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Gm28686-201ENSMUST00000187404 609 ntBASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc180J3QNE4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Gm43364-201ENSMUST00000196046 3274 ntBASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Gm12419-201ENSMUST00000116649 636 ntBASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Gm24844-201ENSMUST00000158679 127 ntBASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Gm23771-201ENSMUST00000178702 110 ntBASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Gm9129-201ENSMUST00000218173 1689 ntBASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc180J3QNE4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm4034-201ENSMUST00000187674 480 ntBASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm5537-201ENSMUST00000091117 1252 ntBASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm42928-201ENSMUST00000197338 3339 ntBASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gm43267-201ENSMUST00000199664 1796 ntBASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
Ccdc180J3QNE4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC22.36■■□□□ 1.17
Ccdc180J3QNE4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC22.36■■□□□ 1.17
Ccdc180J3QNE4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC22.36■■□□□ 1.17
Ccdc180J3QNE4 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC22.36■■□□□ 1.17
Ccdc180J3QNE4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms