Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm29499-201ENSMUST00000189151 486 ntBASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm28329-201ENSMUST00000191208 689 ntBASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm29171-201ENSMUST00000191397 486 ntBASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm43186-201ENSMUST00000198130 824 ntBASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Map1b-203ENSMUST00000223725 2669 ntBASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm9034-201ENSMUST00000182071 1005 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm45398-201ENSMUST00000210561 165 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm13916-201ENSMUST00000117368 628 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm16071-201ENSMUST00000119589 793 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm24844-201ENSMUST00000158679 127 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm21092-201ENSMUST00000178995 955 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Mir7076-201ENSMUST00000183519 74 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm17826-201ENSMUST00000189720 798 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Gm9132-201ENSMUST00000210182 832 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 CT030637.1-201ENSMUST00000228016 669 ntBASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcf11G3X9Z4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gm7537-201ENSMUST00000221660 1414 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gm44414-201ENSMUST00000203660 2109 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gm15352-201ENSMUST00000118696 270 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gm13888-201ENSMUST00000119148 422 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gm4726-201ENSMUST00000135604 736 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gm6019-201ENSMUST00000148369 736 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 CT485607.1-201ENSMUST00000216100 85 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 AC134860.1-201ENSMUST00000224867 660 ntBASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms