Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm26286-201ENSMUST00000104166 134 ntBASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm23912-201ENSMUST00000104687 87 ntBASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm9550-201ENSMUST00000161130 862 ntBASIC14.92□□□□□ -0.02
Ube4aE9Q735 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm8343-201ENSMUST00000182705 994 ntBASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm19353-201ENSMUST00000184561 445 ntBASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm4482-201ENSMUST00000200876 742 ntBASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4aE9Q735 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12616-201ENSMUST00000118594 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12501-201ENSMUST00000119163 529 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm13408-201ENSMUST00000119822 798 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm13935-201ENSMUST00000121859 798 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12624-201ENSMUST00000177615 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12621-201ENSMUST00000177760 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12615-201ENSMUST00000177970 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12622-201ENSMUST00000177975 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12627-201ENSMUST00000178412 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12625-201ENSMUST00000179122 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12614-201ENSMUST00000179586 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm12613-201ENSMUST00000180323 382 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm3332-201ENSMUST00000189337 928 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Ntng1-201ENSMUST00000051253 327 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.91□□□□□ -0.02
Ube4aE9Q735 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ube4aE9Q735 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Gm23251-201ENSMUST00000103773 110 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Gm12165-201ENSMUST00000117047 342 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Gm7851-201ENSMUST00000117574 323 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms