Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm5714-201ENSMUST00000197343 566 ntBASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm8956-201ENSMUST00000203939 825 ntBASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm23680-201ENSMUST00000083162 164 ntBASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf11E9PZM7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Gm12164-201ENSMUST00000121695 551 ntBASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Gm24844-201ENSMUST00000158679 127 ntBASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 AC153962.2-201ENSMUST00000219417 550 ntBASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Lgi3-203ENSMUST00000226548 1001 ntBASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scaf11E9PZM7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms