Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm11422-201ENSMUST00000118925 1103 ntBASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm8342-201ENSMUST00000209839 757 ntBASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm23680-201ENSMUST00000083162 164 ntBASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hfm1D3Z4R1 Gm25766-201ENSMUST00000104101 131 ntBASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Gm44882-201ENSMUST00000205702 802 ntBASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 AC159376.1-201ENSMUST00000218504 630 ntBASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Ap3s1-202ENSMUST00000224622 978 ntBASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Gm5451-201ENSMUST00000080545 579 ntBASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hfm1D3Z4R1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Gm38151-201ENSMUST00000195085 289 ntBASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 AC140375.1-201ENSMUST00000225421 694 ntBASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hfm1D3Z4R1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Gm23272-201ENSMUST00000104053 129 ntBASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Gm24398-201ENSMUST00000157870 109 ntBASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Gm45113-201ENSMUST00000207518 165 ntBASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Gm18059-201ENSMUST00000208073 580 ntBASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hfm1D3Z4R1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms