Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.21□□□□□ -0.45
Chd3B1AR17 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.21□□□□□ -0.45
Chd3B1AR17 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd3B1AR17 Gm5455-201ENSMUST00000058710 715 ntBASIC12.21□□□□□ -0.45
Chd3B1AR17 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd3B1AR17 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd3B1AR17 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Chd3B1AR17 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd3B1AR17 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Chd3B1AR17 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.21□□□□□ -0.46
Chd3B1AR17 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.2□□□□□ -0.46
Chd3B1AR17 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Gm16505-201ENSMUST00000179981 232 ntBASIC12.2□□□□□ -0.46
Chd3B1AR17 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.2□□□□□ -0.46
Chd3B1AR17 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.2□□□□□ -0.46
Chd3B1AR17 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd3B1AR17 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chd3B1AR17 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chd3B1AR17 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd3B1AR17 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.19□□□□□ -0.46
Chd3B1AR17 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd3B1AR17 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd3B1AR17 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd3B1AR17 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Chd3B1AR17 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Chd3B1AR17 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.18□□□□□ -0.46
Chd3B1AR17 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd3B1AR17 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd3B1AR17 Gm26035-201ENSMUST00000083065 308 ntBASIC12.18□□□□□ -0.46
Chd3B1AR17 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd3B1AR17 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms