Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Gm14660-201ENSMUST00000119809 575 ntBASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Gm23931-201ENSMUST00000103842 109 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Gm12314-201ENSMUST00000118104 538 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Gm44405-201ENSMUST00000198952 126 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Gm39404-201ENSMUST00000216350 313 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Gm45930-201ENSMUST00000221330 292 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb1A2AQ07 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Gm13226-201ENSMUST00000117838 404 ntBASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Gm9083-201ENSMUST00000120423 819 ntBASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.73□□□□□ -0.37
Tubb1A2AQ07 Gm44882-201ENSMUST00000205702 802 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms