Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.22□□□□□ -0.77
Trav18A0A075B656 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Gm15703-201ENSMUST00000120250 880 ntBASIC10.22□□□□□ -0.77
Trav18A0A075B656 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Gm19163-201ENSMUST00000223313 780 ntBASIC10.22□□□□□ -0.77
Trav18A0A075B656 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.22□□□□□ -0.77
Trav18A0A075B656 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.21□□□□□ -0.77
Trav18A0A075B656 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.21□□□□□ -0.77
Trav18A0A075B656 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm27331-201ENSMUST00000183705 60 ntBASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm27892-201ENSMUST00000185017 106 ntBASIC10.21□□□□□ -0.77
Trav18A0A075B656 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm29705-201ENSMUST00000212598 474 ntBASIC10.21□□□□□ -0.77
Trav18A0A075B656 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav18A0A075B656 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav18A0A075B656 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.21□□□□□ -0.78
Trav18A0A075B656 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms