Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gm17208-201ENSMUST00000168388 535 ntBASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm2231-201ENSMUST00000125661 612 ntBASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm9002-201ENSMUST00000178437 499 ntBASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm37497-201ENSMUST00000195830 798 ntBASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm9794-201ENSMUST00000202370 423 ntBASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5-4A0A075B652 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm15806-201ENSMUST00000120696 955 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm23363-201ENSMUST00000175024 79 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms