Protein–RNA interactions for Protein: Q9WV27

Atp1a4, Sodium/potassium-transporting ATPase subunit alpha-4, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp1a4Q9WV27 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atp1a4Q9WV27 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atp1a4Q9WV27 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Gm11930-201ENSMUST00000117788 190 ntBASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Gm22334-201ENSMUST00000158070 133 ntBASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Gm44967-201ENSMUST00000207047 631 ntBASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atp1a4Q9WV27 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Gm28693-202ENSMUST00000190758 331 ntBASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Gm8959-201ENSMUST00000213150 571 ntBASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Atp1a4Q9WV27 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atp1a4Q9WV27 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Atp1a4Q9WV27 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atp1a4Q9WV27 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atp1a4Q9WV27 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atp1a4Q9WV27 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atp1a4Q9WV27 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atp1a4Q9WV27 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms