Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Gm19163-201ENSMUST00000223313 780 ntBASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sec61a2Q9JLR1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm8062-201ENSMUST00000139696 444 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm8099-201ENSMUST00000200510 742 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm10268-201ENSMUST00000085340 555 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a2Q9JLR1 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms