Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gm9385-201ENSMUST00000117563 472 ntBASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gm18737-201ENSMUST00000173594 937 ntBASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Spcs1-207ENSMUST00000228767 1008 ntBASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco4Q9JIS3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms