Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm12291-201ENSMUST00000121627 311 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm16379-201ENSMUST00000161469 348 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm8762-201ENSMUST00000193486 339 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm42627-201ENSMUST00000197347 224 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.42□□□□□ -0.42
Tubb3Q9ERD7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tubb3Q9ERD7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms