Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.77□□□□□ -0.36
Nkx2-4Q9EQM3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13937-201ENSMUST00000121000 988 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm9645-201ENSMUST00000197131 792 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm45120-201ENSMUST00000208880 408 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-4Q9EQM3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms