Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm13408-201ENSMUST00000119822 798 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm11450-201ENSMUST00000121144 333 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm13935-201ENSMUST00000121859 798 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm9996-201ENSMUST00000070359 913 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm15131-201ENSMUST00000119124 595 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm15432-201ENSMUST00000121106 195 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm42937-201ENSMUST00000197360 752 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rrp8Q9DB85 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Gm11989-201ENSMUST00000117240 672 ntBASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Gm11362-201ENSMUST00000118838 850 ntBASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Gm15703-201ENSMUST00000120250 880 ntBASIC12.22□□□□□ -0.45
Rrp8Q9DB85 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms