Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.81□□□□□ -0.52
Upk1aQ9D132 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.81□□□□□ -0.52
Upk1aQ9D132 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk1aQ9D132 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Gm27701-201ENSMUST00000184498 110 ntBASIC11.8□□□□□ -0.52
Upk1aQ9D132 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.8□□□□□ -0.52
Upk1aQ9D132 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Gm44882-201ENSMUST00000205702 802 ntBASIC11.8□□□□□ -0.52
Upk1aQ9D132 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Gm8598-201ENSMUST00000221184 836 ntBASIC11.8□□□□□ -0.52
Upk1aQ9D132 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk1aQ9D132 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.79□□□□□ -0.52
Upk1aQ9D132 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.79□□□□□ -0.52
Upk1aQ9D132 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.79□□□□□ -0.52
Upk1aQ9D132 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm13612-201ENSMUST00000119276 390 ntBASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm5866-201ENSMUST00000177881 973 ntBASIC11.79□□□□□ -0.52
Upk1aQ9D132 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm28911-201ENSMUST00000188837 117 ntBASIC11.79□□□□□ -0.52
Upk1aQ9D132 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm24136-201ENSMUST00000083374 165 ntBASIC11.79□□□□□ -0.52
Upk1aQ9D132 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Upk1aQ9D132 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1aQ9D132 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Upk1aQ9D132 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1aQ9D132 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms