Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm28693-202ENSMUST00000190758 331 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm6745-201ENSMUST00000199216 526 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm9908-201ENSMUST00000211534 448 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm6180-201ENSMUST00000065243 498 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Gm8463-201ENSMUST00000208573 613 ntBASIC13.61□□□□□ -0.23
Ssr1Q9CY50 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ssr1Q9CY50 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ssr1Q9CY50 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms