Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf135Q9CWS1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Gm18227-201ENSMUST00000211082 1468 ntBASIC13□□□□□ -0.33
Rnf135Q9CWS1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Gm14723-201ENSMUST00000118686 215 ntBASIC13□□□□□ -0.33
Rnf135Q9CWS1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Gm17383-201ENSMUST00000078739 1041 ntBASIC13□□□□□ -0.33
Rnf135Q9CWS1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Gm43051-201ENSMUST00000201096 2678 ntBASIC13□□□□□ -0.33
Rnf135Q9CWS1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Gm19817-201ENSMUST00000199764 2132 ntBASIC13□□□□□ -0.33
Rnf135Q9CWS1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf135Q9CWS1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Gm15703-201ENSMUST00000120250 880 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Gm1335-201ENSMUST00000121653 386 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Gm9823-201ENSMUST00000051212 327 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf135Q9CWS1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.98□□□□□ -0.33
Rnf135Q9CWS1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf135Q9CWS1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms