Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm12091-201ENSMUST00000146791 830 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm28911-201ENSMUST00000188837 117 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm38671-201ENSMUST00000200573 130 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm12291-201ENSMUST00000121627 311 ntBASIC11.81□□□□□ -0.52
Ska1Q9CPV1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.81□□□□□ -0.52
Ska1Q9CPV1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ska1Q9CPV1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms