Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Gm19040-201ENSMUST00000203280 4726 ntBASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Gm10417-201ENSMUST00000194341 3522 ntBASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Gm21115-201ENSMUST00000187565 2578 ntBASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gtf2a1Q99PM3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Gm37153-201ENSMUST00000193637 231 ntBASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gtf2a1Q99PM3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms