Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm13342-201ENSMUST00000121055 207 ntBASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm8018-201ENSMUST00000173536 789 ntBASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm43758-201ENSMUST00000199500 367 ntBASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtn4rQ99PI8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rtn4rQ99PI8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm10434-201ENSMUST00000101158 471 ntBASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm11531-201ENSMUST00000117614 555 ntBASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm11597-201ENSMUST00000121423 964 ntBASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm2546-201ENSMUST00000182630 991 ntBASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm5950-201ENSMUST00000213337 772 ntBASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm45925-201ENSMUST00000218882 744 ntBASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rtn4rQ99PI8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms