Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Matn2-203ENSMUST00000226766 3252 ntBASIC12.91□□□□□ -0.34
SncaipQ99ME3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.91□□□□□ -0.34
SncaipQ99ME3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaipQ99ME3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.9□□□□□ -0.34
SncaipQ99ME3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.9□□□□□ -0.34
SncaipQ99ME3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm42627-201ENSMUST00000197347 224 ntBASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm18054-201ENSMUST00000207539 555 ntBASIC12.9□□□□□ -0.34
SncaipQ99ME3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.9□□□□□ -0.34
SncaipQ99ME3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm45930-201ENSMUST00000221330 292 ntBASIC12.9□□□□□ -0.34
SncaipQ99ME3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SncaipQ99ME3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.89□□□□□ -0.35
SncaipQ99ME3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SncaipQ99ME3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.89□□□□□ -0.35
SncaipQ99ME3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms