Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm11978-201ENSMUST00000122315 466 ntBASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm27438-201ENSMUST00000183480 110 ntBASIC10.99□□□□□ -0.65
Scrt1Q99M85 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm7003-201ENSMUST00000195089 312 ntBASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm44405-201ENSMUST00000198952 126 ntBASIC10.99□□□□□ -0.65
Scrt1Q99M85 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.99□□□□□ -0.65
Scrt1Q99M85 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm27552-201ENSMUST00000183351 62 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm27844-201ENSMUST00000183613 62 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm37835-201ENSMUST00000193305 361 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm45770-201ENSMUST00000212105 616 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm22058-201ENSMUST00000083393 310 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.98□□□□□ -0.65
Scrt1Q99M85 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Scrt1Q99M85 Daam2-202ENSMUST00000224595 1926 ntBASIC10.97□□□□□ -0.65
Scrt1Q99M85 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms