Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Gm11637-201ENSMUST00000120601 592 ntBASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Gm40466-201ENSMUST00000212174 422 ntBASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Gm19163-201ENSMUST00000223313 780 ntBASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chmp1b1Q99LU0 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.83□□□□□ -0.51
Chmp1b1Q99LU0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chmp1b1Q99LU0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chmp1b1Q99LU0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gm23363-201ENSMUST00000175024 79 ntBASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gm37042-201ENSMUST00000193816 581 ntBASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp1b1Q99LU0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm12742-201ENSMUST00000117326 410 ntBASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm27731-201ENSMUST00000185192 107 ntBASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm45784-201ENSMUST00000188360 142 ntBASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gm10268-201ENSMUST00000085340 555 ntBASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp1b1Q99LU0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms