Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.97□□□□□ -0.33
Lysmd3Q99LE3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm25890-201ENSMUST00000177643 165 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm22614-201ENSMUST00000178300 165 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm18056-201ENSMUST00000207670 568 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm18061-201ENSMUST00000208350 562 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm18063-201ENSMUST00000208529 568 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm18052-201ENSMUST00000208750 559 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm22042-201ENSMUST00000082989 165 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gm26110-201ENSMUST00000083971 165 ntBASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lysmd3Q99LE3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms