Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm15770-201ENSMUST00000117498 584 ntBASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm22923-201ENSMUST00000174952 110 ntBASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm18187-201ENSMUST00000196476 984 ntBASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm5279-201ENSMUST00000199575 745 ntBASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm44146-201ENSMUST00000203508 816 ntBASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb3Q91XZ7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gm14301-201ENSMUST00000120181 324 ntBASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gm11918-201ENSMUST00000121660 179 ntBASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 AC154838.2-201ENSMUST00000226602 747 ntBASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb3Q91XZ7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms