Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm14921-201ENSMUST00000118643 908 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm22121-201ENSMUST00000175148 54 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm27331-201ENSMUST00000183705 60 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm37042-201ENSMUST00000193816 581 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gm23363-201ENSMUST00000175024 79 ntBASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gm27847-201ENSMUST00000183711 107 ntBASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gm27375-201ENSMUST00000183799 107 ntBASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gm8099-201ENSMUST00000200510 742 ntBASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb4Q91XZ6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms