Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Gm6266-201ENSMUST00000203844 806 ntBASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb8Q91XZ2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb8Q91XZ2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb8Q91XZ2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.21□□□□□ -0.46
Pcdhb8Q91XZ2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb8Q91XZ2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb8Q91XZ2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb8Q91XZ2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb8Q91XZ2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb8Q91XZ2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.2□□□□□ -0.46
Pcdhb8Q91XZ2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms