Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Gm26035-201ENSMUST00000083065 308 ntBASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga11Q91XY8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm22331-201ENSMUST00000158066 136 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm29649-201ENSMUST00000185649 419 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm6091-201ENSMUST00000098307 165 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga11Q91XY8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm7561-201ENSMUST00000211203 886 ntBASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm10146-201ENSMUST00000072739 309 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms