Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm15703-201ENSMUST00000120250 880 ntBASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm16479-201ENSMUST00000121706 932 ntBASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm2231-201ENSMUST00000125661 612 ntBASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm37042-201ENSMUST00000193816 581 ntBASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm8463-201ENSMUST00000208573 613 ntBASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SfpqQ8VIJ6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Gm8213-201ENSMUST00000118191 441 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Gm12384-201ENSMUST00000119228 919 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SfpqQ8VIJ6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SfpqQ8VIJ6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SfpqQ8VIJ6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SfpqQ8VIJ6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.14□□□□□ -0.31
SfpqQ8VIJ6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms